Fix macOS symlinked path resolution in watcher

Fix file sync issues and improve mirror stability

Cleanup skill logic files and update deployment scripts

Fix AI loop stalling and large file sync issues

fix(agent): use Optional type hint for Python 3.8 compatibility ...

- Fixes 'TypeError: unsupported operand type(s) for |' on Synology NAS.\n- Bumps version to 1.0.11 to trigger sync.

fix(agent): correct path to bootstrap_installer in updater ...

- Updated the relative path to 3 levels up to correctly find the bootstrapper in the agent-node root.\n- Bumping to 1.0.6.

refactor: organize agent-node client code structure by moving core packages to src/ ...

- Moved agent_node, protos, and shared_core inside src/

- Updated Dockerfile, deployment scripts, compile_protos.sh, installers

- Updated bundle generation in ai-hub to reflect cleaner structure and better README